B19 erythroparvovirus genome is depleted for NNGANN K-mer.
journal contribution
posted on 2020-08-14, 19:42 authored by Florian Poulain, Noémie Lejeune, Kévin Willemart, Nicolas A. GilletCoding sequences (NS1, 7.5k, VP1, X, VP2 and 11k genes) from 18 full-length B19 erythroparvoviruses were depicted by grey lines overlaid by red marks to symbolize NNGANN and green marks to position NNAANN codons.
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SARS-CoV -2 coronavirusesHBVB 19 erythroparvovirusAPOBEC 3sAPOBEC 3s othersAPOBEC 3 footprintviruses APOBEC 3 enzymesputatively APOBEC 3-targeted viruseshost restriction factors APOBEC 3APOBEC 3 selection pressureAPOBEC 3-favored motifsAPOBEC 3-targeted motifsAPOBEC 3 selection pressure impactsHTLVAPOBEC 3 selection pressure thanksHIVAPOBEC 3 restrictiongenomeTC
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