Table_2.xls (9.5 kB)
Potential core and dispensable chromosomes in the genomes of Dothideomycetes.
dataset
posted on 2012-12-06, 00:32 authored by Robin A. Ohm, Nicolas Feau, Bernard Henrissat, Conrad L. Schoch, Benjamin A. Horwitz, Kerrie W. Barry, Bradford J. Condon, Alex C. Copeland, Braham Dhillon, Fabian Glaser, Cedar N. Hesse, Idit Kosti, Kurt LaButti, Erika A. Lindquist, Susan Lucas, Asaf A. Salamov, Rosie E. Bradshaw, Lynda Ciuffetti, Richard C. Hamelin, Gert H. J. Kema, Christopher Lawrence, James A. Scott, Joseph W. Spatafora, B. Gillian Turgeon, Pierre J. G. M. de Wit, Shaobin Zhong, Stephen B. Goodwin, Igor V. GrigorievMycosphaerella graminicola has been shown previously to contain dispensable (i.e., not necessary for survival) chromosomes [24]. These chromosomes are smaller, less gene-dense and more repeat-rich than the core chromosomes. Proteins encoded by genes on these chromosomes less frequently contain a PFAM domain. Scaffolds with similar characteristics are also present in five other Dothideomycetes. Additional statistics for these scaffolds are given in Table S12.
