Differences in overlap statistics between WAP and DEG scores as a function of the average PFP value.

A: Differences between maxR values for WAP and DEG scores. B: Differences between AUC values for WAP and DEG scores. Top 200 WAPs in each data set of a simulated pair are used to calculate maxR, AUC and PFP. Plots summarize results obtained with 2 × 105 random partitions of GSE58095.