posted on 2021-10-14, 17:40authored byYuval Bussi, Ruti Kapon, Ziv Reich
(A) NSSC is plotted against k-mer length for eight genomes as an example: Homo sapiens, Gallus gallus, Dinoponera quadriceps, Theobroma cacao, Saccharomyces cerevisiae, Escherichia coli, Sorangium cellulosum, and Nanoarchaeum equitans (see Fig 3C for a schematic of idealized NSSC curves). Genome lengths varied widely, from ~0.5Mbp for N. equitans to ~3Gbp for H.sapiens. A histogram of the minimum NSSC for all 5805 genomes is shown in (B). The minimum NSSC usually occurs within the range 0.4–0.9 (0.668 ± 0.123 [mean ± STD]).