Phylogenetic position of the lamprey and hagfish melanopsins.
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posted on 2014-09-24, 03:14 authored by Lanfang Sun, Emi Kawano-Yamashita, Takashi Nagata, Hisao Tsukamoto, Yuji Furutani, Mitsumasa Koyanagi, Akihisa TerakitaBoth the lamprey and hagfish melanopsins belong to the Opn4m group. The bootstrap probabilities >80% were indicated. Scale bar, 0.1 substitutions per site. The accession numbers of the sequences are as follows: amphioxus Opn4, AB205400; chicken OPN4M, AY882944; chicken OPN4X, AY036061; clawed frog opn4m, XP002937616; clawed frog opn4x, AF014797; hagfish Opn4m, AB932627; human OPN4, AF147788; lamprey Opn4m, AB932626; mouse Opn4, AF147789; pufferfish Opn4m-1, XP_003963814; pufferfish Opn4m-2, XP_003976773; pufferfish Opn4x-1, XP_003965597; pufferfish Opn4x-2, XP_003974868; zebrafish opn4m-1, GQ925715; zebrafish opn4m-2, AY078161; zebrafish opn4m-3, GQ925717; zebrafish opn4x-1, GQ925718; zebrafish opn4x-2, GQ925719.
