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Map of the FNP ATCC 10953 genome.

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posted on 2007-08-01, 02:07 authored by Sandor E. Karpathy, Xiang Qin, Jason Gioia, Huaiyang Jiang, Yamei Liu, Joseph F. Petrosino, Shailaja Yerrapragada, George E. Fox, Susan Kinder Haake, George M. Weinstock, Sarah K. Highlander

The inner circle (orange) shows the percent GC calculated using a sliding window of 5 kb. The triangles in the next circle show the location and directionality of tRNAs (red) and ncRNAs (blue). The next tract shows the coordinate scale; this is surrounded by the ORFs, on both strands. ORFs are colored by category, as follows: tan, cell processes; purple, cell structure; red; DNA replication and recombination; blue, general metabolism; green, regulation; yellow, transcription; orange, translation, cyan, transport; fuchsia, virulence; and black, unknown. The IStrons are indicated by the fuchsia arrowheads on the outside circle; the intact IStron is indicated with the star. Plasmid (green) and phage locations (cyan) also appear on the outside circle.

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