Sample collection, processing and RNA extraction: Whole blood was collected in triplicate followed by peripheral blood mononuclear cells (PBMCs) separation in a subset of samples.
posted on 2019-12-06, 18:28authored byAarti Gautam, Duncan Donohue, Allison Hoke, Stacy Ann Miller, Seshamalini Srinivasan, Bintu Sowe, Leanne Detwiler, Jesse Lynch, Michael Levangie, Rasha Hammamieh, Marti Jett
The following sample collection tubes were used for the study: RNAgard®, PAXgene® RNA, EDTA, ACD-A, and CPT tubes. The PBMC separation was done using standard procedures for CPT tubes, and magnetic bead, LeukoLOCK™ and LSM methods. The samples were then stored at either 4°C (Cold) or -80°C (Frozen) and shipped overnight (o/n) for follow-up RNA extraction. Next, they were treated with one or more of several different RNA extraction procedures: Biomaxi Precip Buffer/ PAXgene® Blood miRNA, PAXgene® Blood miRNA, TRIzol® LS, ACK Lysing Buffer/ Qiagen miRNeasy, and TRIzol® Reagent manufacturer’s protocol.