ppat.1009916.g003.tif (140.1 kB)

Epidemiological trajectories inferred from the virus sequence data using ABC or Beast2.

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posted on 14.09.2021, 17:40 by Gonché Danesh, Victor Virlogeux, Christophe Ramière, Caroline Charre, Laurent Cotte, Samuel Alizon

The lines show the median natural logarithm values and the envelopes the 95% CI of trajectories corresponding to the number of infected cases through time, for each host type. Simulations were performed using the TiPS package from posterior distributions results of the ABC inference or the Beast2 bdmm inference.