pntd.0009787.g007.tif (3.01 MB)
BWA MEM v0.7.12-alignment of the Taenia solium mitochondrial RNA to the mtDNA of other Taenia species.
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posted on 2021-12-10, 18:34 authored by Henrik Sadlowski, Veronika Schmidt, Jonathan Hiss, Johannes A. Kuehn, Christian G. Schneider, Gideon Zulu, Alex Hachangu, Chummy S. Sikasunge, Kabemba E. Mwape, Andrea S. Winkler, Markus SchuelkeAlignment can only be found in areas of high conservation at the mtDNA genes encoding the subunit I of the cytochrome C oxidase (cox1) and the small and large mitochondrial rRNA fragments. (A) IGV visualization of the alignment to the T. saginata mtDNA, (B) annotation of the Taenia saginata mtDNA. (C) IGV visualization of the alignment to the Taenia asiatica mtDNA, (D) annotation of the Taenia asiatica mtDNA.
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workflow could helpone major reasonnew method allowinginternational post officeendemic regions preciselydiv >< pbasic laptop computerhealth personnel equippedbasic laboratory toolsimprove diagnostic specificitymake exact diagnosestaenia solium individual patients basedindividual patientsdiagnostic laboratorytaenia solium health educationdiagnostic laboratoriestranscriptome datatranscript countssubspecies classificationsaginata remains challengingregionally reduceprovide firstpreventive antiparasitic chemotherapyneurological diseaseless invasiveincidental findingshydatigena high riskeven eliminatebunsen burnerbioinformatic processingasiatica
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