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Amino acid substitutions that model PCH1b in Rrp40 alter levels of RNA exosome subunits.

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posted on 2020-07-09, 17:56 authored by Derrick J. Morton, Binta Jalloh, Lily Kim, Isaac Kremsky, Rishi J. Nair, Khuong B. Nguyen, J. Christopher Rounds, Maria C. Sterrett, Brianna Brown, Thalia Le, Maya C. Karkare, Kathryn D. McGaughey, Shaoyi Sheng, Sara W. Leung, Milo B. Fasken, Kenneth H. Moberg, Anita H. Corbett

(A) Lysates prepared from heads of control Rrp40wt or Rrp40 mutant flies were resolved by SDS-PAGE and analyzed by immunoblotting with antibodies to detect RNA exosome Cap Subunits, Rrp40/EXOSC3 and Rrp4/EXOSC2, and Core Subunit Mtr3/EXOSC6. Both LaminD and Stain Free, as a measure of total protein, serve as loading controls. (B) Results from (A) were quantitated for RNA exosome cap subunits levels (Rrp40 and Rrp4- bands for Mtr3 had too much background to yield reproducible results) and are presented as Relative Protein Levels with the value from the control Rrp40-WT flies set to 1.0. Asterisks (*) indicate results that show statistical significance at *p-value< 0.05. Results that show no statistical significance when compared are indicated by NS.

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