Singular enrichment analysis (SEA) using AGriGO for genes more than two-fold differently expressed in psy2l versus WT.
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posted on 2017-07-05, 17:55 authored by Amr R. A. Kataya, Maria T. Creighton, Toga P. Napitupulu, Christine Sætre, Behzad Heidari, Peter Ruoff, Cathrine LilloGO terms of special interest for the phenotype observed are presented. Genes were sorted as Up or Down- regulated. Non-significant is marked as ns. Input number for two-fold up-regulated genes were 1227 and 1196, and two-fold down-regulated were 1290 and 1793 genes for rosette leaves and seedlings, respectively. Number of genes in background reference (BG/Ref) is given for each GO term. Total annotated number in background reference was 31819 genes.
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WTfactors PSY 2PP 2A protein phosphatasePP 4 subunit genescell cycle inhibitor gene WEE 1CRINKLYpsy 2l mutantsArabidopsis PSY 2LGlobal transcript analysisPLATINUM SENSITIVE 2sugar-phosphate transporter GPT 2gibberellic acid levelsTT 8. Expressionpsy 2l seedlingsPP 4Rpsy 2lmaster regulator PAP 1stress responses Eukaryotic protein phosphatase 4WAGabscisic acid levelsPSY 2L genePSY 2LEUKARYOTIC ELONGATION FACTOR 5ASeveral DNA damage response genes
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