Genomic characteristics of assembled genomes.
dataset
posted on 2025-04-03, 17:34 authored by Deborah Yebon Kang, Mohammad Tarequl Islam, Roméo Wakayansam Bouba, Zoua Wadoubé, Moussa Djaouda, Yann Felix BoucherANI was compared with the closest species, either V. cholerae (GCF_008369605.1) or V. paracholerae (GCF_003311965.1) reference genome. Other genomic statistics are included: genome length, the number of contigs, N50, length of the longest and shortest contigs, GC content, average sequencing coverage, total number of coding sequences (CDS), rRNA, and tRNA genes.
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div >< pindirect genetic interactionsenvironmental water sourceso1 classical typecholera studies focusvibrio cholerae environmental novc strainscholerae genetic diversityenvironmental surveillanceenvironmental strainstcpa o139 environmentalvirulence potentialsuggesting directphylogenetic relationshipspandemic strainso1 strainso1 pandemicnovc strainslikely facilitatedinfection potentialincreasingly recognizedhuman carriershighly conservedgene foundfindings underscoredynamic relationshipscontinental transmissionsclosely relatedclinical strainscentral africa
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