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Venn diagram of differentially co-expressed genes in both sugarcane cultivar after S. scitamineum inoculation at different time points.
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posted on 2014-08-29, 02:59 authored by Youxiong Que, Yachun Su, Jinlong Guo, Qibin Wu, Liping XuDR24, DR48 and DR120 denote differentially expressed gene sets obtained from “ROC”22 samples at 24, 48 and 120 h after S. scitamineum inoculation compared to control sample at 24 h after water inoculation, respectively; DY24, DY48 and DY120 denote differentially expressed gene sets obtained from Yacheng05-179 samples at 24, 48 and 120 h after S. scitamineum inoculation compared to control sample at 24 h after water inoculation, respectively; All DEGs, all differentially expressed genes; Up-regulation DEGs, up-regulated genes; Down-regulation DEGs, down-regulated genes.
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disease inoculation experimentsGlobal Viewsugarcane smutsugarcane chitinase genedifferentiallyplant hormone signal transductionpcrrocgene annotationsexpression dataSporisorium scitamineumscitamineum interactionsSporisorium scitamineum ChallengeIllumina dataPathway enrichment analysisdefense mechanismsEnergy productionTranscriptome DynamicsIon transportresistance specificitycell wall fortification pathwayflavonoid biosynthesistranscriptome sequencingchitinase gene ScChi showsignal transduction mechanisms120 hsugarcane genotypessugarcane responsesTranscriptome analysisscitamineum infectionObtained unigenessugarcane industrytranscript expressionssugarcane diseaseCorrelation analysis
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