Figure_2.tif (308.87 kB)
The relative performance of PWMs and DWMs in predicting binding targets in yeast.
figure
posted on 2010-03-22, 02:15 authored by Rahul SiddharthanThe figure shows Pearson correlation coefficients of binding site predictions with ChIP binding -values reported by Harbison et al.. [19], using the “raw” position weight matrices from MacIsaac et al.. [20], dinucleotide weight matrices with the same “width” as the “raw” matrices, and dinucleotide weight matrices with a 10bp “flanking sequence” on either side of the input matrices. Details are in Materials and Methods.