Polymorphism summary and test for multilocus linkage disequilibrium in Venturia inaequalis samples.

a

sample size.

b

number of haplotypes.

c

clonal fraction.

d

allelic richness.

e

expected heterozygosity [56].

f

unique allele richness.

g

for each sample, values (±standard deviation) are averaged across loci and across 100 resampled datasets of 12 individuals.

h

index of association [59]. The null hypothesis of random association of alleles (I_A = 0), consistent with random mating, was tested using the program Multilocus[60] by comparing the observed value of the statistic to that obtained after 1000 randomization to simulate recombination.