Fig_1.tif (721.23 kB)
Illumina Sequence coverage of Arabidopsis cDNAs.
figure
posted on 2016-01-18, 14:26 authored by Loren A. Honaas, Eric K. Wafula, Norman J. Wickett, Joshua P. Der, Yeting Zhang, Patrick P. Edger, Naomi S. Altman, J. Chris Pires, James H. Leebens-Mack, Claude W. dePamphilisCoverage of all detected genes by sequencing reads. The darkest bar represents the number of detected genes not tagged, and each progressively lighter bar represents genes in a bin with a 5% increase in coverage, with the two lightest bars showing the number of genes covered at >90% and >99%, respectively. Normalized BR12 = Normalized Illumina library from pooled biological replicates 1 and 2, BR12 = combined coverage of Illumina biological replicates 1 and 2, BR1 = Illumina biological replicate 1, BR2 = Illumina biological replicate 2.
History
Usage metrics
Categories
Keywords
assemblerbenchmark Illumina transcriptome dataSCERNAOryza sativa transcriptomesArabidopsis leaf transcriptome99 transcriptome assembliesLessons Learnedtranscriptome assembly strategiesArabidopsis thalianachimeric assembliesabundance transcriptsclcNormalized librariesassembly improvementSuperior De Novo Transcriptome AssembliesControlled analysestranscriptome assemblieslack 1000Plant GenomeArabidopsis genes
Licence
Exports
RefWorks
BibTeX
Ref. manager
Endnote
DataCite
NLM
DC