FliA binding and regulation at known and novel targets.

(A–F) Mapped reads from ChIP-seq and RNA-seq experiments. Genes and operons of interest are boxed (dotted black line) and labelled. Within each panel, both lanes of ChIP-seq data are scaled equivalently, and all three lanes of RNA-seq are scaled equivalently. Relative scales are indicated below each panel. Dotted gray lines indicate that mapped reads exceed the scale shown. (G) Gene expression, relative to mreB, measured by RT-PCR. Gene names are indicated on the x-axis and strain are indicated in the legend (n = 4–7). Statistical comparisons of were performed using two-sample T tests between the indicated groups: * p<0.05, ** p<0.01 (two-tailed).