Distributions of expression levels for rice and fungal annotated transcripts.

The distributions of the expression levels (log2 RPKMs) are shown for rice (A, B) and blast fungus (C, D). For rice, (A) the control (NPB) and infected (NPB+Ina86-137) samples in the compatible interaction and (B) the control (NPB) and infected (NPB+P91-15B) samples in the incompatible interaction are compared. For blast fungus, (C) the control (Ina86-137) and infected (NPB+Ina86-137) samples in the compatible interaction and (D) the control (P91-15B) and infected (NPB+P91-15B) samples in the incompatible interaction are compared. Significantly differentially expressed transcripts between the control and infected conditions are plotted in colors (red: upregulated, blue: downregulated). Pearson's correlation coefficients (R2) between replicates are presented.