Figure_4.tif (280.25 kB)
Cluster heatmap of expression patterns of differentially co-expressed genes in both sugarcane cultivars at different time points after S. scitamineum inoculation.
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posted on 2014-08-29, 02:59 authored by Youxiong Que, Yachun Su, Jinlong Guo, Qibin Wu, Liping XuT1, T2, T3 and T4 denote “ROC”22 at 24 h after water inoculation, and at 24, 48 and 120 h after S. scitamineum inoculation, respectively; T5, T6, T7 and T8 denote Yacheng05-179 at 24 h after water inoculation, and at 24, 48 and 120 h after S. scitamineum inoculation, respectively; k1∼k9 indicate nine distinct expression patterns of differentially co-expressed genes.
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disease inoculation experimentsGlobal Viewsugarcane smutsugarcane chitinase genedifferentiallyplant hormone signal transductionpcrrocgene annotationsexpression dataSporisorium scitamineumscitamineum interactionsSporisorium scitamineum ChallengeIllumina dataPathway enrichment analysisdefense mechanismsEnergy productionTranscriptome DynamicsIon transportresistance specificitycell wall fortification pathwayflavonoid biosynthesistranscriptome sequencingchitinase gene ScChi showsignal transduction mechanisms120 hsugarcane genotypessugarcane responsesTranscriptome analysisscitamineum infectionObtained unigenessugarcane industrytranscript expressionssugarcane diseaseCorrelation analysis
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