Fig_2.tif (1.54 MB)
Circular phylogram based on the polymorphisms in the drug resistance genes of Mycobacterium tuberculosis isolates.
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posted on 2015-02-26, 02:58 authored by Asho Ali, Zahra Hasan, Ruth McNerney, Kim Mallard, Grant Hill-Cawthorne, Francesc Coll, Mridul Nair, Arnab Pain, Taane G. Clark, Rumina HasanMaximum likelihood analyses were performed with single nucleotide polymorphism identified in the drug resistance genes using Dendroscope software, version 3.2.8. Scale bar indicates 1% nucleotide divergence in the genes. Branch length corresponds to number of genetic polymorphisms inferred.
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Genome sequencingMTB lineagesgenotypic testingWhole Genome SequencingIsoniazid resistancedrug resistance detectionpncA sequencingfluoroquinolone resistancewgsMycobacterium tuberculosisRNA genescodonXDR strainsrifampicin resistanceDrug Resistancestrain populationsgyrB mutationsgenotypic resistancenucleotide polymorphismspncA SNPs94Adetection drug resistance40 genes
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