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Venn diagram of organ-specific up-regulated genes with alternative splicing (AS) events in Oryza longistaminata under 7-day chilling stress conditions.

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posted on 2017-11-30, 18:51 authored by Ting Zhang, Liyu Huang, Yinxiao Wang, Wensheng Wang, Xiuqin Zhao, Shilai Zhang, Jing Zhang, Fengyi Hu, Binying Fu, Zhikang Li

Shoot-Up-AS, Rhizome-Up-AS, Shoot-Up, and Rhizome-Up refer to up-regulated genes with AS in shoots, up-regulated genes with AS in rhizomes, specifically up-regulated genes in shoots, and specifically up-regulated genes in rhizomes, respectively, under chilling stress.

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    stress responseTFhigh-throughput RNA sequencinglongistaminataDEGGATAtranscriptional regulationKEGG pathway analysesCBFstress signal transductionICE 1-binding siteWRKYrice CT improvementMYBgenes encoding antioxidant enzymespost-transcriptional regulation mechanisms synergistically7 daysrhizomeRNA sequencing RiceAPcell death process

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