The process of obtaining the class labels for the Cav1 blobs using wide-field CAVIN1/PTRF mask. The class labels are necessary to train the machine learning models to identify the Cav1 blobs types automatically.
(A) The first row shows the imaged wide-field TIRF CAVIN1/PTRF mask before and after morphological closing. The morphological closing operation is used to close the small holes in the consecutive regions of CAVIN1/PTRF mask. The CAVIN1/PTRF regions are delineated in yellow to highlight the locations of the CAVIN1/PTRF regions in the cell. (B) The second row shows the Cav1 blobs and the overlay of the Cav1 blobs with the wide-field CAVIN1/PTRF mask to label the blobs into PTRF+ and PTRF-. The caveolae structures have a minimum of 60 Cav1 molecule per blob  that can be used to stratify the PTRF+ blobs into PTRF+≥ 60 and PTRF+< 60. Our goal is to use machine learning approaches to automatically identify the PTRF+≥ 60 blobs (caveolar domains) from the rest of the non-caveolar domains (i.e. PTRF+< 60 and PTRF-) using different features and data representations of the blobs.