pone.0210123.g004.tif (962.98 kB)
The Zn(II) metal binding pocket of holo-ZitRMG dimer.
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posted on 2019-02-12, 18:34 authored by Paloma Fernández Varela, Christophe Velours, Magali Aumont-Niçaise, Blandine Pineau, Pierre Legrand, Isabelle PoquetOnly the protomer A is shown in green. Zn(II) atoms are represented as small green spheres and their ligands as ball-and-sticks, with their N, O and S atoms respectively colored in blue, red and yellow. (A) Electron density map of the whole Zn(II) binding pocket. 2Fo-Fc contoured at 1.0σ is displayed as a cyan mesh. Internuclear Zn(II)-Zn(II) distance is indicated close to a grey dashed line between Zn(II) atoms. (B) Zn(II) binding site 1 and (C) Zn(II) binding site 2. Coordination bonds are represented as green dashed lines. A grey dashed line is shown between a residue atom and a Zn(II) atom when their distance is ≥ 3 Å.
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helix-turn-helix DNA-binding domainZitRMarR superfamilyMulti Angle Light ScatteringbacteriaSize Exclusion Chromatography-coupledLactococcus lactis speciesFerric uptake regulatorMGrepressorIsothermal Titration Calorimetry showZnpalindromic operator sitesStreptococcaceae group useMarR metallo-regulator subgroup
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