pgen.1008435.g002.tif (2.11 MB)
Representative genomic context of FusA homologues.
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posted on 2019-10-15, 17:25 authored by Rhys Grinter, Pok Man Leung, Lakshmi C. Wijeyewickrema, Dene Littler, Simone Beckham, Robert N. Pike, Daniel Walker, Chris Greening, Trevor LithgowThe genetic organisation of FusA homologues identified in HMMER search is shown. Labelled arrows represent genes that were present adjacent to FusA in the sequence clusters outlined in Fig 1. Genes homologous to Fus operon members are labelled accordingly, while other genes are labelled according to the function of their closest characterised homologue. A predicted function for genes is provided below, predictions in bold are based on the function of proteins from the Fus, while predictions in italics are based on function of homologous proteins. A full list of genetic context for FusA homologues, where available, is listed in S1 Table.
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gene clustersGram-negative plant pathogensferredoxin uptake systemM 16 protease familyferredoxin processing protease FusCStructural analysisFusC shareFus homologues YddBgene cluster encoding proteinsuptake machineriesmembrane protein YddB sharesperiplasmic localisationplant hostsgenus Pectobacteriumprotein ferredoxinextracellular substrate binding siteEscherichia coliGram-negative bacteria BacteriaGram-negative bacteriaProtease-associated import systemsiron-dependent expressiontransport ferredoxinimport systemsmembrane ferredoxin transporter FusAPqqL
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