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Impact on variant calling of increased sequencing depth.

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posted on 2016-03-22, 06:26 authored by Anne Bruun Krøigård, Mads Thomassen, Anne-Vibeke Lænkholm, Torben A. Kruse, Martin Jakob Larsen

The impact on variant calling of increased sequencing depth for SNV and indel calling are shown in left and right panels, respectively. The number of called positions called in exome sequencing only, validation data only and both data set, depicted in blue, green and red, respectively. This analysis only includes regions that are successfully covered (at least 200 x) in the deep sequencing data.

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