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Bacterial communities in swab and debridement samples.

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posted on 2017-11-20, 18:30 authored by Lindsay Kalan, Mi Zhou, Michele Labbie, Benjamin Willing

The 249 species level OTUs identified from the specimens are classified according to their corresponding phylum. The venn diagram shows 120 OTUs that are found in both debridement and swab specimens, while 59 OTUs are debridement-specific and 70 OTUs are swab-specific (as indicated by the square). OTUs with at least 2-fold numerical differences in relative abundance (>1% for at least one sample type) between the swab and debridement samples. Allobaculum sp. is more abundant in swab samples, while an undefined Burkholderiales sp. and Roseateles depolymerans are more abundant in debridement samples.

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