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A comparison of validation for identifying RNA-editing sties using RED and REDItools in an analysis of a sample data-set with 28 experimentally validated C→U RNA editing sites.

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posted on 2016-03-01, 06:55 authored by Yongmei Sun, Xing Li, Di Wu, Qi Pan, Yuefeng Ji, Hong Ren, Keyue Ding

TP, true positive; FP, false positive; TN, true negative; and FN, false negative.

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    GPLv 3 licensecommand line toolsite levelsDNA sequencing dataVisualizing RNA Editing Sitesuser interfacesoftware frameworkStatistical Filters RNA editingGUIDBMSRNA editinggene expression levelsRNA Editing sites DetectorRNA editing sitesMySQL database management systemprotein sequencesacid substitutions

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