10.1371/journal.pone.0085448.g001 Bodour Salhia Bodour Salhia Jeff Kiefer Jeff Kiefer Julianna T. D. Ross Julianna T. D. Ross Raghu Metapally Raghu Metapally Rae Anne Martinez Rae Anne Martinez Kyle N. Johnson Kyle N. Johnson Danielle M. DiPerna Danielle M. DiPerna Kimberly M. Paquette Kimberly M. Paquette Sungwon Jung Sungwon Jung Sara Nasser Sara Nasser Garrick Wallstrom Garrick Wallstrom Waibhav Tembe Waibhav Tembe Angela Baker Angela Baker John Carpten John Carpten Jim Resau Jim Resau Timothy Ryken Timothy Ryken Zita Sibenaller Zita Sibenaller Emanuel F. Petricoin Emanuel F. Petricoin Lance A. Liotta Lance A. Liotta Ramesh K. Ramanathan Ramesh K. Ramanathan Michael E. Berens Michael E. Berens Nhan L. Tran Nhan L. Tran DNA Copy Number Analysis of Breast Brain Metastasis. Public Library of Science 2014 Computational biology Molecular genetics gene expression microarrays genetics Cancer genetics epigenetics genomics Molecular cell biology Obstetrics and gynecology breast cancer oncology Basic cancer research metastasis Tumor physiology Cancers and neoplasms Breast tumors 2014-01-29 04:05:44 Figure https://plos.figshare.com/articles/figure/_DNA_Copy_Number_Analysis_of_Breast_Brain_Metastasis_/918258 <p>GISTIC analysis was conducted on Agilent SurePrint G3 Human CGH Microarray data for 15 breast brain metastases. Significant false discovery rates (Q-values) for amplified (red) and deleted (blue) regions are plotted genome-wide. Annotations for a few of the significant regions are shown. Focal amplifications and deletions are annotated in boldface, and broad amplifications and deletions are annotated in non-boldface. Q-values for deleted and amplified genes are displayed along the x-axis on top and bottom of the figure, respectively.</p>