Phylogenies simulated on time-integrated static skewed-clustered networks.
Cornelia Metzig
Oliver Ratmann
Daniela Bezemer
Caroline Colijn
10.1371/journal.pcbi.1006761.g003
https://plos.figshare.com/articles/figure/Phylogenies_simulated_on_time-integrated_static_skewed-clustered_networks_/7772081
<p>We compare trees from outbreaks on networks with mean degrees and for infection rates <i>β</i> = 0.05 and <i>β</i> = 0.1. All trees have 500 tips. Simulated trees to this figure are found in <a href="http://www.ploscompbiol.org/article/info:doi/10.1371/journal.pcbi.1006761#pcbi.1006761.s002" target="_blank">S2 File</a>.</p>
2019-02-26 18:36:59
contact networks
network dynamics influence
modelling contact networks
contact network
use tree shape features
HIV
use sequence data
pathogen phylogenetic trees