RNA-Seq analysis of <i>PKS8-1</i> cluster genes.
Roslyn D. Noar
Elizabeth Thomas
Margaret E. Daub
10.1371/journal.pone.0212229.g004
https://plos.figshare.com/articles/figure/RNA-Seq_analysis_of_i_PKS8-1_i_cluster_genes_/7697753
<p><i>PKS8-1</i> and adjacent genes in the <i>P</i>. <i>fijiensis</i> genome are represented by arrows indicating their direction, with descriptions of putative protein functions indicated below the arrows. Blue arrows = genes predicted by Noar and Daub [<a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0212229#pone.0212229.ref018" target="_blank">18</a>] to be part of the <i>PKS8-1</i> gene cluster; Gray arrows = genes predicted by Noar and Daub [<a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0212229#pone.0212229.ref018" target="_blank">18</a>] to flank the <i>PKS8-1</i> gene cluster. Scale bar indicates 5 kb. Black bars are proportional to log2FC values of expression in leaf tissue vs. culture medium. Single asterisks represent significant expression differences at p<0.05, and double asterisks represent significant expression differences at p<0.01. NE = no expression detected.</p>
2019-02-08 18:50:16
novel polyketide synthase gene cluster
2 weeks post-inoculation
constitutive expression
fungus Pseudocercospora fijiensis Pseudocercospora fijiensis
PKS 8-1 cluster shares genes
time course analysis
genome analysis
pathogens Pseudocercospora musae
MFS
gene expression analysis
transcription factor gene
PKS 8-1
cladofulvin pathways
disease development
Pseudocercospora species support
fijiensis PKS 8-1 gene