Comparison of all-atom models generated using fragment distributions estimated from all-atom models versus coarse-grained models.
David Simoncini
Kam Y. J. Zhang
10.1371/journal.pone.0068954.t001
https://plos.figshare.com/articles/dataset/_Comparison_of_all_atom_models_generated_using_fragment_distributions_estimated_from_all_atom_models_versus_coarse_grained_models_/755593
<p>1‰ C<i><sub>α</sub></i>RMSD is the average over the 1‰ lowest C<i><sub>α</sub></i>RMSD to native models. Similarly, 1% C<i><sub>α</sub></i>RMSD is the average over the 1% lowest C<i><sub>α</sub></i>RMSD to native models. Best model is the single lowest C<i><sub>α</sub></i>RMSD to native model. is a dataset of models obtained by generating coarse-grained followed by 's fast Relax protocol. In , the fast Relax protocol is embedded in each iteration and contributes to the estimation of distributions. Data in bold are statistically better with a confidence greater than 95% according to the Student's <i>t</i>-test.</p>
2013-07-25 03:10:24
biophysics
Protein folding
Computational biology
genomics
Structure prediction
Macromolecular structure analysis
protein structure
algorithms
Applied mathematics
all-atom
generated
distributions
coarse-grained