Overlap of OTUs generated using Uclust between/among technical replicates at different sequencing depth.
Chongqing Wen
Liyou Wu
Yujia Qin
Joy D. Van Nostrand
Daliang Ning
Bo Sun
Kai Xue
Feifei Liu
Ye Deng
Yuting Liang
Jizhong Zhou
10.1371/journal.pone.0176716.g002
https://plos.figshare.com/articles/figure/Overlap_of_OTUs_generated_using_Uclust_between_among_technical_replicates_at_different_sequencing_depth_/4951262
<p>At a sequencing depth of about 30,000 reads, overlap of both two and three replicates was approaching a plateau when singletons were not removed.</p>
2017-04-28 17:28:04
treatment effects
amplicon sequencing
16 S rRNA gene amplicons
V 4 region
16 S rRNA gene
UMI
sequence abundance
MiSeq
18 soil samples
gene amplicon sequencing
PCR
replicate
reproducibility
Detrended correspondence analysis
OTU sequence abundance
OTU overlap