Comparison of expression of <i>elt-2</i>-regulated genes during development and aging.
Frederick G. Mann
Eric L. Van Nostrand
Ari E. Friedland
Xiao Liu
Stuart K. Kim
10.1371/journal.pgen.1005956.g004
https://plos.figshare.com/articles/figure/Comparison_of_expression_of_i_elt-2_i_-regulated_genes_during_development_and_aging_/3951822
<p>For each class of <i>elt-2</i>-regulated genes(general intestinal function, intestinal establishment and adult function), the heatmaps show how the genes are expressed during development and aging. Only genes profiled in all three experiments are shown. (A-C) General intestinal genes. (A) Heatmap shows expression changes of the general intestinal genes during development using RNA-seq data from Gerstein <i>et al</i>., 2014. Values are Log<sub>2</sub> expression fold changes during normal development relative to early embryos. Timepoints are early embryo (EE), late embryo (LE), L1, L2, L3, L4, and Day 1 of adulthood. (B) Heatmap showing expression of the general intestinal genes of ELT-2 during aging, using DNA microarray data from Budovskaya <i>et al</i>. 2008. Values are Log<sub>2</sub> expression fold changes during aging relative to Day 2. Timepoints are Days 2, 5, 8, and 11 of adulthood. (C) Heatmaps showing expression of the general intestinal genes following <i>elt-2</i> RNAi in the L1 and L4 larval stages. Values are log<sub>2</sub> fold change in <i>elt-2</i> RNAi compared to control RNAi. (D-F) Intestinal establishment genes. Similar to (A-C). (G-I) Adult function genes. Similar to (A-C).</p>
2016-04-12 23:02:10
ELT -2 decreases
elt -2
gene expression changes
elegan
modENCODE ChIP-seq data
GATA transcription factor
regulator ELT -2
GATA Transcription Factor ELT -2