Impact on variant calling of increased sequencing depth.
Anne Bruun Krøigård
Mads Thomassen
Anne-Vibeke Lænkholm
Torben A. Kruse
Martin Jakob Larsen
10.1371/journal.pone.0151664.g004
https://plos.figshare.com/articles/figure/Impact_on_variant_calling_of_increased_sequencing_depth_/3136654
<p>The impact on variant calling of increased sequencing depth for SNV and indel calling are shown in left and right panels, respectively. The number of called positions called in exome sequencing only, validation data only and both data set, depicted in blue, green and red, respectively. This analysis only includes regions that are successfully covered (at least 200 x) in the deep sequencing data.</p>
2016-03-22 06:26:58
Somatic variant callers
breast cancer patients
exome sequencing
SNV
variant callers
Targeted Deep Sequencing Data
mutation
sequencing data
Somatic Variant Callers