<i>TLR4</i> linkage disequilibrium (LD) plot. Yen-Ching Chen Ping-Keung Yip Yi-Ling Huang Yu Sun Li-Li Wen Yi-Min Chu Ta-Fu Chen 10.1371/journal.pone.0050771.g001 https://plos.figshare.com/articles/figure/_TLR4_linkage_disequilibrium_LD_plot_/192993 <p>This plot was generated by Haploview program using data from this study. Five common (frequency≥0.05) htSNPs formed one block. The SNP name, e.g., SNP1, SNP2, etc., indicated five htSNPs genotyped in this study. Four common haplotypes were identified. The level of pairwise r<sup>2</sup>, which indicated the association degree between two SNPs in the LD block, was shown in the cell of the LD structure in numeric. The level of pair-wise D', which indicated the strength of LD between two SNPs, was shown in the LD structure in gray scale.</p> 2012-12-18 00:49:53 linkage disequilibrium