10.1371/journal.pcbi.1002829.g005 Jens Vindahl Kringelum Jens Vindahl Kringelum Claus Lundegaard Claus Lundegaard Ole Lund Ole Lund Morten Nielsen Morten Nielsen Predictions for Gp120 plotted on the protein structure including bound antibody. Public Library of Science 2012 gp120 plotted bound 2012-12-27 02:00:54 Figure https://plos.figshare.com/articles/figure/_Predictions_for_Gp120_plotted_on_the_protein_structure_including_bound_antibody_/187254 <p>Each residue in the structure is colored from blue to red according to its <i>DiscoTope-2.0</i> score. Blue indicates low scores (predicted to be non-epitope residue) and red indicates high scores (predicted to be epitope residue). Yellow indicates possible glycosylation sites retrieved from UNIPROT accession number P04578 (<a href="http://www.uniprot.org" target="_blank">www.uniprot.org</a>). a) Gp120 surface representation and antibody cartoon representation. b) Gp120 and antibody cartoon representation. Note, the red alpha-1 helix, which is normally buried in the inner domain of Gp120 involved in Gp41∶Gp120 complex formation, is exposed in the crystal structure.</p>