TE families enriched for genes up-regulated in response to abiotic stress.
Irina Makarevitch
Amanda J. Waters
Patrick T. West
Michelle Stitzer
Candice N. Hirsch
Jeffrey Ross-Ibarra
Nathan M. Springer
10.1371/journal.pgen.1004915.t001
https://plos.figshare.com/articles/dataset/_TE_families_enriched_for_genes_up_regulated_in_response_to_abiotic_stress_/1286609
a<p>Number of expressed genes with a TE insertion within 1 kb from the transcription start site.</p>b<p>Percent of up-regulated genes relative to all expressed genes with a TE insertion. <sup>c</sup>Fold enrichment values (F.E.) for TE families are calculated relative to up-regulated genes among all expressed genes under the same stress condition. <sup>d</sup>Log<sub>2</sub>(stress/control) was calculated from aggregated read counts for corresponding TE families and represent the level of stress-induced up-regulation of the TE from a certain family.</p><p>TE families enriched for genes up-regulated in response to abiotic stress.</p>
2015-01-08 03:30:25
Abiotic Stress Transposable elements
TE families
gene expression response
stress conditions
gene expression
dna
Many genes exhibit
abiotic stress
TE transcript levels