10.1371/journal.pgen.1004915.t001
Irina Makarevitch
Irina
Makarevitch
Amanda J. Waters
Amanda
J. Waters
Patrick T. West
Patrick
T. West
Michelle Stitzer
Michelle
Stitzer
Candice N. Hirsch
Candice
N. Hirsch
Jeffrey Ross-Ibarra
Jeffrey
Ross-Ibarra
Nathan M. Springer
Nathan
M. Springer
TE families enriched for genes up-regulated in response to abiotic stress.
Public Library of Science
2015
Abiotic Stress Transposable elements
TE families
gene expression response
stress conditions
gene expression
dna
Many genes exhibit
abiotic stress
TE transcript levels
2015-01-08 03:30:25
Dataset
https://plos.figshare.com/articles/dataset/_TE_families_enriched_for_genes_up_regulated_in_response_to_abiotic_stress_/1286609
a<p>Number of expressed genes with a TE insertion within 1 kb from the transcription start site.</p>b<p>Percent of up-regulated genes relative to all expressed genes with a TE insertion. <sup>c</sup>Fold enrichment values (F.E.) for TE families are calculated relative to up-regulated genes among all expressed genes under the same stress condition. <sup>d</sup>Log<sub>2</sub>(stress/control) was calculated from aggregated read counts for corresponding TE families and represent the level of stress-induced up-regulation of the TE from a certain family.</p><p>TE families enriched for genes up-regulated in response to abiotic stress.</p>